资 源 简 介
The BioWiki is a collection of bioinformatics tools that can be pieced together in a very easy and flexible manner to perform both simple and complex tasks.
1st Project: SQAC
--Sequencing platform free Quality Analysis/Control/error Correction pipeline
The next-generation sequencing included whole genome sequencing(WGS), transcriptome
sequencing (whole cDNA sequencing, RNA-seq), digital gene expression sequencing (Tag-Seq),
ChIP-Seq, and so on. And there are many sequencing platform to generate sequece, as well
know Sanger/ABi(the frist generation), Solexa/illumina, SOLiD/ABi, 454/Roche. But thier
sequence format is different, also they have different error type. High quality data is very important for further analysis or data mining. So here we plan to develop a pipeline for raw sequence quality analysis and control with few of process for reporting reads quality statistical details, trimming, filtering, and error correction.
FASTQ check
