资 源 简 介
A scalable parallel software for large-scale protein/DNA sequence graph construction.
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SVN checkcout: $ svn checkout http://psgraph.googlecode.com/svn/trunk/ psgraph-read-only
Download: http://code.google.com/p/psgraph/downloads/list
Reference
_pGraph_ Nonblocking version C. Wu, A. Kalyanaraman, W. Cannon. pGraph: Efficient parallel construction of large-scale protein sequence homology graphs. IEEE Transactions on Parallel and Distributed Systems (TPDS), doi: http://doi.ieeecomputersociety.org/10.1109/TPDS.2012.19.
Abstract—Detecting sequence homology between protein sequences is a fundamental problem in computational molecular biology, with a pervasive application in nearly all analyses that aim to structurally and functionally characterize protein molecules. While detecting the homolo
