资 源 简 介
Please go to https://bitbucket.org/wsu_bcb/apicoap for downloading the newest software and documentation.
ApicoAP: The first computational model for identifying apicoplast-targeted proteins in multiple species of Apicomplexa
Reference
Gokcen Cilingir, Shira L. Broschat, and Audrey O.T. Lau. ApicoAP: The First Computational Model for Identifying Apicoplast-Targeted Proteins in Multiple Species of Apicomplexa. 2012. PLoS ONE. 7(5)
Abstract
Background: Most of the parasites of the phylum Apicomplexa contain a relict prokaryotic-derived plastid called the apicoplast. This organelle is important not only for the survival of the parasite, but its unique properties make it an ideal drug target. The majority of apicoplast-associated proteins are nuclear encoded and targeted post-translationally to the organellar lumen via a bipartite signaling mechanism that requires an N-terminal signal and transit
文 件 列 表
ApicoAP_CL.py
ApicoAP_fastaHelper.py
ApicoAP_GUI.py
exampleFiles
Babesia bovis_negative_wholeSeq.fasta
Babesia bovis_positive_wholeSeq.fasta
Babesia microti_negative_wholeSeq.fasta
Babesia microti_positive_wholeSeq.fasta
Eimeria tenella_negative_wholeSeq.fasta
Eimeria tenella_positive_wholeSeq.fasta
Neospora caninum_negative_wholeSeq.fasta
Neospora caninum_positive_wholeSeq.fasta
Plasmodium berghei_negative_wholeSeq.fasta
Plasmodium berghei_positive_wholeSeq.fasta
Plasmodium chabaudi_negative_wholeSeq.fasta
Plasmodium chabaudi_positive_wholeSeq.fasta
Plasmodium cynomolgi_negative_wholeSeq.fasta
Plasmodium cynomolgi_positive_wholeSeq.fasta
Plasmodium falciparum_negative_wholeSeq.fasta
Plasmodium falciparum_positive_wholeSeq.fasta
Plasmodium knowlesi_negative_wholeSeq.fasta
Plasmodium knowlesi_positive_wholeSeq.fasta
Plasmodium vivax_negative_wholeSeq.fasta
Plasmodium vivax_positive_wholeSeq.fasta
Plasmodium yoelii_negative_wholeSeq.fasta
Plasmodium yoelii_positive_wholeSeq.fasta
Theileria annulata_negative_wholeSeq.fasta
Theileria annulata_positive_wholeSeq.fasta
Theileria parva_negative_wholeSeq.fasta
Theileria parva_positive_wholeSeq.fasta
Toxoplasma gondii_negative_wholeSeq.fasta
Toxoplasma gondii_positive_wholeSeq.fasta
GUI_splash_v3.gif
README.txt
Rules
BBOV.rules
BMIC.rules
ETEN.rules
NCAN.rules
PBER.rules
PCHA.rules
PCYN.rules
PFAL.rules
PKNO.rules
PVIV.rules
PYOE.rules
TANN.rules
TGON.rules
TPAR.rules
signalP_wsdlClient.py
